NJIT Bioinformatics Data Mining Software
 
Software packages and tools, all open source
Project Description More Info
Biosequence data analysis
Sdiscover Tool for finding motifs in sequences Homepage
Tree data analysis
TMatch Tool for comparing ordered trees Homepage
UpdownDistance Tool for comparing phylogenetic trees Homepage
RNA data analysis
RADAR Tool for aligning RNA secondary structures Homepage
Utility software
APSI Tool for calculating average pairwise sequence identity Homepage
Databases
RmotifDB Search engine for a database of RNA secondary structure motifs Homepage
GLEAN-UTR DB A database of RNA motifs in UTRs of human and mouse mRNAs Homepage


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Mon Sep 8 01:53:26 EDT 2008